Miyakogusa Predicted Gene

Lj1g3v4093500.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N8P6_SOYBN 583 68.1 75.4 (tr|I1N8P6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G05140.1 301 43.0 54.6 | Symbols: | Transcription elongation factor (TFIIS) family protein | chr5:1520353-1522297 FORWARD LENGTH=436
Medicago Medtr7g089140.9 546 65.0 73.2 | transcription elongation factor (TFIIS) family protein | HC | chr7:34862524-34858706 | 20130731
Soybean Glyma19g30780.1 583 68.1 75.4  
LJGI gnl|LJGI|TC61522 886 95.7 95.7 similar to UniRef100_A7PTA6 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4093500.2 length: 446 aa.
IPR003617 Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMSmart SM00509 Domain 4.3e-13 134-209
IPR017923 Transcription factor IIS, N-terminal
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006351 transcription, DNA-dependent    
Gene3D G3DSA:1.20.930.10 no description 4.1e-18 134-214
HMMPfam PF08711 Med26 4.7e-14 158-208
ProfileScan PS51319 TFIIS_N 21.627 135-210
superfamily SSF47676 Conserved 4.5e-19 124-224
no_ID  
Coil coil coiled-coil NA 382-417
HMMPanther PTHR15141 TRANSCRIPTION 2.3e-92 1-375
HMMPanther PTHR15141:SF32 ELONGIN-A-RELATED 2.3e-92 1-375
Seg seg seg NA 70-83
119-130
142-151
235-240
Wolf-PSORT
Lj1g3v4093500.2	chlo 11, nucl 1, cyto 1, mito 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4093500.2