Miyakogusa Predicted Gene

Lj1g3v4082060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N8N2_SOYBN 1582 82.1 86.7 (tr|I1N8N2) Ubiquitin carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=2
TAIR_pep AT2G40930.1 1212 65.9 77.0 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Medicago Medtr7g088760.1 1527 80.5 86.2 | ubiquitin carboxyl-terminal hydrolase-like protein | HC | chr7:34635406-34624173 | 20130731
Soybean Glyma03g27790.1 1572 82.0 86.4  
LJGI gnl|LJGI|TC74727 959 99.4 99.4 similar to UniRef100_O22207 Cluster: Ubiquitin carboxyl-terminal hydrolase 5; n=1; Arabidopsis thaliana|Rep: Ubiquitin carboxyl-terminal hydrolase 5 - Arabidopsis thaliana (Mouse-ear cress), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4082060.1 length: 923 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 1.7e-88 318-909
ProfileScan PS50235 UCH_2_3 34.731 320-913
IPR006615 Peptidase C19, ubiquitin-specific peptidase, DUSP domain
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
HMMPfam PF06337 DUSP 5.5e-23 37-143
HMMSmart SM00695 Domain 5e-35 33-146
ProfileScan PS51283 DUSP 17.834 14-143
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 321-336
PatternScan PS00973 UCH_2_2 NA 854-871
no_ID  
Gene3D G3DSA:3.30.2230.10 no description 1.3e-31 9-157
HMMPanther PTHR24006 FAMILY 0 12-916
HMMPanther PTHR24006:SF24 SUBFAMILY 0 12-916
Seg seg seg NA 265-281
317-328
673-683
superfamily SSF143791 DUSP-like 4.9e-26 8-145
superfamily SSF54001 Cysteine 1.5e-103 315-912
superfamily SSF54236 Ubiquitin-like 8.6e-06 161-242
Wolf-PSORT
Lj1g3v4082060.1	nucl 7, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4082060.1