Miyakogusa Predicted Gene

Lj1g3v4081900.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KEL5_SOYBN 866 79.5 87.0 (tr|K7KEL5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G48570.1 501 51.6 69.2 | Symbols: ROF2, ATFKBP65, FKBP65 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr5:19690746-19693656 REVERSE LENGTH=578
Medicago Medtr8g080980.1 506 51.6 70.0 | peptidyl-prolyl cis-trans isomerase FKBP62-like protein | HC | chr8:34977709-34974074 | 20130731
Soybean Glyma03g27750.1 723 78.1 86.6  
LJGI gnl|LJGI|TC65901 1017 99.6 99.6 weakly similar to UniRef100_A7R4L2 Cluster: Chromosome undetermined scaffold_734, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_734, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4081900.2 length: 533 aa.
IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
method AccNumber shortName E-value location
Biological Process GO:0006457 protein folding    
HMMPfam PF00254 FKBP_C 8.8e-14 46-133
160-228
277-366
ProfileScan PS50059 FKBP_PPIASE 13.144 48-136
281-369
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.5e-26 391-528
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 14.684 435-502
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.002 386-419
435-468
469-502
ProfileScan PS50005 TPR 9.411 386-419
435-468
469-502
IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type
HMMPanther PTHR10516 PEPTIDYL-PROLYL 3.6e-171 24-528
no_ID  
Gene3D G3DSA:3.10.50.40 no description 4.1e-27 22-135
140-226
258-390
HMMPanther PTHR10516:SF66 PEPTIDYL-PROLYL 3.6e-171 24-528
HMMPfam PF13414 TPR_11 1.8e-09 440-500
Seg seg seg NA 262-270
505-519
superfamily SSF48452 TPR-like 1.1e-24 374-526
superfamily SSF54534 FKBP-like 5.3e-14 26-136
224-390
142-220
Wolf-PSORT
Lj1g3v4081900.2	nucl 6, cyto 4, chlo 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4081900.2