Miyakogusa Predicted Gene
- Lj1g3v4080580.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7L4T1_MEDTR |
153 |
81.3 |
90.1 |
(tr|G7L4T1) Protein Mpv17 OS=Medicago truncatula GN=MTR_7g088590 PE=4 SV=1 |
| TAIR_pep |
AT5G19750.1 |
124 |
64.1 |
76.1 |
| Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr5:6677124-6679127 FORWARD LENGTH=288 |
| Medicago |
Medtr7g088590.2 |
153 |
81.3 |
90.1 |
| peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | HC | chr7:34521820-34525349 | 20130731 |
| Soybean |
Glyma19g30520.1 |
152 |
49.3 |
56.6 |
|
| LJGI |
gnl|LJGI|TC72906 |
973 |
100.0 |
100.0 |
similar to UniRef100_Q2HUU8 Cluster: WD-40 repeat; n=1; Medicago truncatula|Rep: WD-40 repeat - Medicago truncatula (Barrel medic), partial (36%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4080580.1 |
length: 206 aa. |
| IPR007248 |
Mpv17/PMP22 |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| HMMPanther |
PTHR11266 |
PEROXISOMAL |
4.2e-26 |
60-192 |
| no_ID |
|
| HMMPanther |
PTHR11266:SF4 |
SUBFAMILY |
4.2e-26 |
60-192 |
| Seg |
seg |
seg |
NA |
75-102 |
- Wolf-PSORT
Lj1g3v4080580.1 plas 4, chlo 2, E.R. 2, golg 2, cysk_plas 2, nucl 1, cyto 1, mito 1, vacu 1, cyto_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4080580.1 |
|