Miyakogusa Predicted Gene
- Lj1g3v4048440.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MY05_SOYBN |
560 |
86.2 |
94.2 |
(tr|K7MY05) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G05000.1 |
436 |
65.0 |
82.2 |
| Symbols: TOC34, ATTOC34, OEP34 | translocon at the outer envelope membrane of chloroplasts 34 | chr5:1474262-1475772 REVERSE LENGTH=313 |
| Medicago |
Medtr7g088050.1 |
516 |
80.7 |
91.3 |
| translocon at the outer envelope membrane ofs protein | HC | chr7:34259934-34263900 | 20130731 |
| Soybean |
Glyma19g30210.3 |
556 |
86.2 |
94.2 |
|
| LJGI |
gnl|LJGI|TC63084 |
1859 |
99.6 |
99.6 |
similar to UniRef100_Q41009 Cluster: Translocase of chloroplast 34; n=1; Pisum sativum|Rep: Translocase of chloroplast 34 - Pisum sativum (Garden pea), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4048440.1 |
length: 316 aa. |
| IPR005688 |
Chloroplast protein import component Toc34 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006886 |
intracellular protein transport |
|
|
| Cellular Component |
GO:0009707 |
chloroplast outer membrane |
|
|
| Molecular Function |
GO:0015450 |
P-P-bond-hydrolysis-driven protein transmembrane transporter activity |
|
|
| HMMPIR |
PIRSF038134 |
Translocon |
7.4e-243 |
1-309 |
| HMMTigr |
TIGR00991 |
3a0901s02IAP34: |
3.1e-176 |
1-310 |
| IPR006703 |
AIG1 |
| Molecular Function |
GO:0005525 |
GTP binding |
|
|
| HMMPfam |
PF04548 |
AIG1 |
9.2e-38 |
38-228 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
6e-30 |
6-257 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
1.9e-74 |
7-256 |
| HMMPanther |
PTHR10903 |
GTPASE, |
3.4e-48 |
2-235 |
| HMMPanther |
PTHR10903:SF23 |
SUBFAMILY |
3.4e-48 |
2-235 |
- Wolf-PSORT
Lj1g3v4048440.1 chlo 8, nucl 3, cyto 1, mito 1, plas 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4048440.1 |
Not targeted |
-48.554 |
-0.005 |
-3.088 |
71.75% |
-45.460
|