Miyakogusa Predicted Gene

Lj1g3v4047310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JND0_MEDTR 1032 73.0 82.2 (tr|G7JND0) Inter-alpha-trypsin inhibitor heavy chain H3 OS=Medicago truncatula GN=MTR_4g058700 PE=4 SV=1
TAIR_pep AT5G60710.1 748 57.1 69.5 | Symbols: | Zinc finger (C3HC4-type RING finger) family protein | chr5:24410953-24414849 REVERSE LENGTH=704
Medicago Medtr4g058700.1 1032 73.0 82.2 | zinc finger, C3HC4 type (RING finger) protein | HC | chr4:21590095-21595659 | 20130731
Soybean Glyma09g33640.1 218 31.7 47.8  
LJGI gnl|LJGI|TC78771 1021 99.8 99.8 similar to UniRef100_A7NZL5 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4047310.1 length: 720 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.3e-10 81-127
HMMSmart SM00184 Ring 7.1e-07 82-125
ProfileScan PS50089 ZF_RING_2 12.120 82-126
IPR002035 von Willebrand factor, type A
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.40.50.410 no description 7e-29 271-458
HMMPfam PF00092 VWA 1.3e-23 274-451
HMMSmart SM00327 von 2.3e-25 272-454
ProfileScan PS50234 VWFA 16.293 274-458
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.3e-11 77-134
no_ID  
HMMPanther PTHR10579 CALCIUM-ACTIVATED 0 58-703
HMMPanther PTHR10579:SF5 ZINC 0 58-703
Seg seg seg NA 21-31
51-66
583-595
superfamily SSF53300 vWA-like 7.1e-35 272-493
superfamily SSF57850 RING/U-box 1.1e-13 77-141
Wolf-PSORT
Lj1g3v4047310.1	nucl 6, mito 4, chlo 2, cyto_mito 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4047310.1