Miyakogusa Predicted Gene

Lj1g3v4027100.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1N8H9_SOYBN 958 66.0 73.3 (tr|I1N8H9) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT5G17910.2 234 41.1 55.5 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1). | chr5:5927906-5932292 FORWARD LENGTH=1342

Medicago Medtr7g087490.1 838 60.7 69.0 | transmembrane protein, putative | HC | chr7:34061823-34056369 | 20130731

Soybean Glyma19g30070.1 850 61.1 68.2

LJGI gnl|LJGI|AV777933 672 100.0 100.0 similar to UniRef100_A7Q9Y6 Cluster: Chromosome chr8 scaffold_68, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_68, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v4027100.1 length: 808 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 29-40
42-48
308-318
430-442

Wolf-PSORT

Lj1g3v4027100.1 nucl 12, chlo 1, vacu 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v4027100.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1N8H9_SOYBN	958	66.0	73.3	(tr\|I1N8H9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT5G17910.2	234	41.1	55.5	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1). \| chr5:5927906-5932292 FORWARD LENGTH=1342
Medicago	Medtr7g087490.1	838	60.7	69.0	\| transmembrane protein, putative \| HC \| chr7:34061823-34056369 \| 20130731
Soybean	Glyma19g30070.1	850	61.1	68.2
LJGI	gnl\|LJGI\|AV777933	672	100.0	100.0	similar to UniRef100_A7Q9Y6 Cluster: Chromosome chr8 scaffold_68, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr8 scaffold_68, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)

no_ID
Lj1g3v4027100.1				length: 808 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	29-40 42-48 308-318 430-442