Miyakogusa Predicted Gene

Lj1g3v3992540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B7FL74_MEDTR 263 54.4 63.6 (tr|B7FL74) WUSCHEL-related homeobox OS=Medicago truncatula GN=MTR_7g086940 PE=2 SV=1
TAIR_pep AT5G17810.2 124 84.6 90.8 | Symbols: WOX12 | WUSCHEL related homeobox 12 | chr5:5880576-5882602 REVERSE LENGTH=268
Medicago Medtr7g086940.1 263 54.4 63.6 | wuschel-related homeobox protein | HC | chr7:33813041-33816667 | 20130731
Soybean Glyma03g01000.1 152 68.2 80.9  
LJGI gnl|LJGI|BP035388 1094 99.8 99.8 homologue to UniRef100_A2Q4C9 Cluster: Homeodomain-related; n=1; Medicago truncatula|Rep: Homeodomain-related - Medicago truncatula (Barrel medic), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3992540.1 length: 282 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 7.5e-13 33-93
HMMSmart SM00389 Homeodomain 8.3e-07 31-98
ProfileScan PS50071 HOMEOBOX_2 11.256 29-94
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.5e-07 13-94
superfamily SSF46689 Homeodomain-like 6.8e-14 22-105
no_ID  
HMMPanther PTHR24326 FAMILY 3.7e-63 25-264
HMMPanther PTHR24326:SF67 SUBFAMILY 3.7e-63 25-264
Seg seg seg NA 87-97
105-119
141-170
Wolf-PSORT
Lj1g3v3992540.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3992540.1