Miyakogusa Predicted Gene

Lj1g3v3978180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9S5K5_RICCO 222 64.7 77.6 (tr|B9S5K5) Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0977820 PE=3 SV=1
TAIR_pep AT4G10250.1 139 50.7 66.7 | Symbols: ATHSP22.0 | HSP20-like chaperones superfamily protein | chr4:6370537-6371124 FORWARD LENGTH=195
Medicago Medtr1g076910.1 151 49.1 64.0 | 22.0 kDa class IV heat shock protein | HC | chr1:34323349-34322497 | 20130731
Soybean Glyma13g04350.1 214 68.2 77.6  
LJGI gnl|LJGI|BW596392 58.0 86.9 86.9 similar to UniRef100_P30236 Cluster: 22.0 kDa class IV heat shock protein precursor; n=1; Glycine max|Rep: 22.0 kDa class IV heat shock protein precursor - Glycine max (Soybean), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3978180.1 length: 196 aa.
IPR002068 Alpha crystallin/Hsp20 domain
method AccNumber shortName E-value location
HMMPfam PF00011 HSP20 5.4e-30 74-177
ProfileScan PS01031 HSP20 25.386 74-163
IPR008978 HSP20-like chaperone
superfamily SSF49764 HSP20-like 5.3e-41 29-174
no_ID  
Gene3D G3DSA:2.60.40.790 no description 7.7e-44 40-177
HMMPanther PTHR11527 SMALL 1.6e-47 31-195
HMMPanther PTHR11527:SF14 HEAT-SHOCK 1.6e-47 31-195
Seg seg seg NA 10-22
110-122
Wolf-PSORT
Lj1g3v3978180.1	vacu 4, mito 2, extr 2, E.R. 2, chlo 1, nucl 1, cyto 1, golg 1, cyto_nucl 1, cyto_mito 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3978180.1