Miyakogusa Predicted Gene
- Lj1g3v3975890.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5VYK8_PRUPE |
211 |
55.6 |
64.4 |
(tr|M5VYK8) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006813mg PE=4 SV=1 |
| TAIR_pep |
AT3G55350.1 |
165 |
43.1 |
55.5 |
| Symbols: | PIF / Ping-Pong family of plant transposases | chr3:20518518-20520690 FORWARD LENGTH=406 |
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
Glyma20g23150.2 |
167 |
46.8 |
55.6 |
|
| LJGI |
gnl|LJGI|GO036207 |
105 |
94.2 |
94.2 |
similar to UniRef100_A2Q269 Cluster: Trp repressor/replication initiator; n=1; Medicago truncatula|Rep: Trp repressor/replication initiator - Medicago truncatula (Barrel medic), partial (11%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3975890.1 |
length: 177 aa. |
| IPR026103 |
Harbinger transposase-derived nuclease |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR22930 |
UNCHARACTERIZED |
5.5e-19 |
20-152 |
| no_ID |
|
| HMMPfam |
PF13359 |
DDE_4 |
6.3e-17 |
49-130 |
- Wolf-PSORT
Lj1g3v3975890.1 cyto 8, extr 2, cysk 2, nucl 1, plas 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3975890.1 |
|