Miyakogusa Predicted Gene
- Lj1g3v3975710.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N8A7_SOYBN |
501 |
82.5 |
91.6 |
(tr|I1N8A7) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G79450.1 |
370 |
64.7 |
78.4 |
| Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:29887831-29889904 FORWARD LENGTH=350 |
| Medicago |
Medtr7g086110.1 |
447 |
81.6 |
88.1 |
| LEM3 (ligand-effect modulator 3) family protein | HC | chr7:33402566-33400955 | 20130731 |
| Soybean |
Glyma19g29130.1 |
479 |
84.9 |
93.2 |
|
| LJGI |
gnl|LJGI|AV409341 |
636 |
100.0 |
100.0 |
similar to UniRef100_A7PTQ1 Cluster: Chromosome undetermined scaffold_30, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_30, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3975710.1 |
length: 286 aa. |
| IPR005045 |
Protein of unknown function DUF284, transmembrane eukaryotic |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPIR |
PIRSF015840 |
Lem3/Cdc50 |
4.3e-120 |
4-286 |
| HMMPanther |
PTHR10926 |
CELL |
6.5e-122 |
7-286 |
| HMMPfam |
PF03381 |
CDC50 |
1.8e-68 |
64-286 |
| no_ID |
|
| HMMPanther |
PTHR10926:SF0 |
SUBFAMILY |
6.5e-122 |
7-286 |
- Wolf-PSORT
Lj1g3v3975710.1 cyto 5.5, cyto_nucl 4.5, nucl 2.5, golg 2.5, golg_plas 2, chlo 1, vacu 1, E.R. 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3975710.1 |
|