Miyakogusa Predicted Gene

Lj1g3v3975580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MF37_SOYBN 1700 78.1 82.9 (tr|K7MF37) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G03790.2 1050 67.0 81.9 | Symbols: | ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein | chr3:963195-967857 FORWARD LENGTH=1081
Medicago Medtr7g086050.1 1649 76.0 81.9 | regulator of chromosome condensation (RCC1) family protein | HC | chr7:33375891-33366899 | 20130731
Soybean Glyma16g04300.1 1700 78.1 82.9  
LJGI gnl|LJGI|TC67738 728 99.7 99.7 similar to UniRef100_A7PZZ9 Cluster: Chromosome chr8 scaffold_41, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_41, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3975580.1 length: 1082 aa.
IPR000408 Regulator of chromosome condensation, RCC1
method AccNumber shortName E-value location
FPrintScan PR00633 RCCNDNSATION 3e-14 155-171
189-202
208-224
265-281
302-318
318-332
415-433
HMMPfam PF00415 RCC1 1.5e-11 155-202
206-260
265-312
316-366
ProfileScan PS50012 RCC1_3 11.730 154-205
206-264
265-315
316-369
370-425
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 0.065 25-58
62-91
96-125
ProfileScan PS50088 ANK_REPEAT 11.381 62-94
96-128
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Gene3D G3DSA:2.130.10.30 no description 5.4e-71 154-431
superfamily SSF50985 RCC1/BLIP-II 2.2e-61 156-473
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 7.3e-23 848-867
HMMPfam PF12796 Ank_2 4.2e-16 40-127
ProfileScan PS50297 ANK_REP_REGION 26.045 40-128
superfamily SSF48403 Ankyrin 3.8e-22 40-136
no_ID  
HMMPanther PTHR22870 REGULATOR 0 1-676
HMMPanther PTHR22870:SF6 REGULATOR 0 1-676
Seg seg seg NA 741-756
767-795
864-886
887-903
982-996
Wolf-PSORT
Lj1g3v3975580.1	nucl 9, chlo 3, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3975580.1