Miyakogusa Predicted Gene

Lj1g3v3975280.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1N897_SOYBN 377 71.7 79.4 (tr|I1N897) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G03860.1 241 45.6 71.7 | Symbols: ATAPRL5, APRL5 | APR-like 5 | chr3:992465-994315 FORWARD LENGTH=300

Medicago Medtr6g029240.1 321 65.5 79.4 | 5-adenylylsulfate reductase-like protein | HC | chr6:10053541-10059871 | 20130731

Soybean Glyma19g28980.1 377 71.7 79.4

LJGI gnl|LJGI|AV423063 874 100.0 100.0 weakly similar to UniRef100_A7PW43 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v3975280.1 length: 289 aa.

IPR012336 Thioredoxin-like fold

method AccNumber shortName E-value location

Gene3D G3DSA:3.40.30.10 no description 6.8e-11 56-150

superfamily SSF52833 Thioredoxin-like 1.4e-14 49-151

IPR013766 Thioredoxin domain

Biological Process GO:0045454 cell redox homeostasis

HMMPfam PF00085 Thioredoxin 5e-08 52-147

no_ID

HMMPanther PTHR18929 PROTEIN 9.6e-13 65-156

Seg seg seg NA 14-36
272-288

Wolf-PSORT

Lj1g3v3975280.1 vacu 6, chlo 3, E.R._vacu 3, extr 2, chlo_mito 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v3975280.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1N897_SOYBN	377	71.7	79.4	(tr\|I1N897) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G03860.1	241	45.6	71.7	\| Symbols: ATAPRL5, APRL5 \| APR-like 5 \| chr3:992465-994315 FORWARD LENGTH=300
Medicago	Medtr6g029240.1	321	65.5	79.4	\| 5-adenylylsulfate reductase-like protein \| HC \| chr6:10053541-10059871 \| 20130731
Soybean	Glyma19g28980.1	377	71.7	79.4
LJGI	gnl\|LJGI\|AV423063	874	100.0	100.0	weakly similar to UniRef100_A7PW43 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)

IPR012336	Thioredoxin-like fold
Lj1g3v3975280.1				length: 289 aa.
method	AccNumber	shortName	E-value	location
Gene3D	G3DSA:3.40.30.10	no description	6.8e-11	56-150
superfamily	SSF52833	Thioredoxin-like	1.4e-14	49-151
IPR013766	Thioredoxin domain
Biological Process	GO:0045454	cell redox homeostasis
HMMPfam	PF00085	Thioredoxin	5e-08	52-147
no_ID
HMMPanther	PTHR18929	PROTEIN	9.6e-13	65-156
Seg	seg	seg	NA	14-36 272-288