Miyakogusa Predicted Gene
- Lj1g3v3975270.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S7H1_LOTJA |
523 |
95.1 |
95.5 |
(tr|I3S7H1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G18130.1 |
120 |
42.0 |
62.7 |
| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5995634-5997165 FORWARD LENGTH=280 |
| Medicago |
Medtr7g085790.1 |
206 |
53.5 |
61.3 |
| transmembrane protein, putative | HC | chr7:33263998-33261569 | 20130731 |
| Soybean |
Glyma19g28970.1 |
221 |
52.3 |
65.0 |
|
| LJGI |
gnl|LJGI|TC74534 |
1576 |
100.0 |
100.0 |
similar to UniRef100_A7PW44 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (53%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3975270.2 |
length: 264 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
9-20 |
- Wolf-PSORT
Lj1g3v3975270.2 chlo 4, nucl 3.5, cysk_nucl 2.5, plas 2, cyto 1, mito 1, extr 1, vacu 1, golg_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3975270.2 |
Not targeted |
-27.083 |
-2.717 |
-1.761 |
24.59% |
-22.604
|