Miyakogusa Predicted Gene

Lj1g3v3974990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1N872_SOYBN 754 64.2 75.2 (tr|I1N872) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G54385.2 476 47.7 60.4 | Symbols: | ARM repeat superfamily protein | chr1:20301289-20303048 REVERSE LENGTH=560
Medicago Medtr6g032885.1 659 58.4 71.4 | ARM repeat protein | HC | chr6:10224831-10221378 | 20130731
Soybean Glyma19g28690.1 754 64.2 75.2  
LJGI gnl|LJGI|TC59882 1338 100.0 100.0 similar to UniRef100_A7PW59 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3974990.1 length: 599 aa.
IPR007022 Survival motor neuron interacting protein 1
method AccNumber shortName E-value location
Biological Process GO:0000245 spliceosomal complex assembly    
Biological Process GO:0000398 mRNA splicing, via spliceosome    
HMMPanther PTHR12794 GEMIN2 4.3e-65 9-285
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.9e-06 235-290
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.9e-08 8-290
no_ID  
HMMPanther PTHR12794:SF0 SUBFAMILY 4.3e-65 9-285
Seg seg seg NA 135-153
258-271
427-440
Wolf-PSORT
Lj1g3v3974990.1	chlo 7, nucl 5, plas 1, golg 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3974990.1