Miyakogusa Predicted Gene

Lj1g3v3964670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7MXL5_SOYBN 863 68.2 78.6 (tr|K7MXL5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G02220.1 528 46.3 62.4 | Symbols: ATPSKR1, PSKR1 | phytosulfokin receptor 1 | chr2:584098-587124 REVERSE LENGTH=1008
Medicago Medtr2g078810.1 415 41.4 54.9 | LRR receptor-like kinase | HC | chr2:33000589-32995956 | 20130731
Soybean Glyma19g27320.1 783 70.4 80.8  
LJGI gnl|LJGI|FS339384 1340 100.0 100.0 weakly similar to UniRef100_A7PNI2 Cluster: Chromosome chr1 scaffold_22, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_22, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3964670.1 length: 674 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.1 185-206
330-351
429-448
452-471
559-576
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 1.6e+02 110-134
159-183
207-230
231-254
351-374
556-580
no_ID  
FPrintScan PR00019 LEURICHRPT 3.4e-05 429-442
556-569
Gene3D G3DSA:3.80.10.10 no description 5.7e-43 63-228
230-379
513-615
HMMPanther PTHR24420 FAMILY 1.9e-173 93-617
HMMPanther PTHR24420:SF215SUBFAMILY NOT 1.9e-173 93-617
Seg seg seg NA 287-301
647-659
superfamily SSF52047 RNI-like 2.3e-43 91-391
302-598
Wolf-PSORT
Lj1g3v3964670.1	plas 8, vacu 3, E.R. 1, pero 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3964670.1