Miyakogusa Predicted Gene

Lj1g3v3964530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MF59_SOYBN 329 64.5 71.0 (tr|K7MF59) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G32890.1 126 37.0 46.3 | Symbols: GATA9 | GATA transcription factor 9 | chr4:15875598-15876615 FORWARD LENGTH=308
Medicago Medtr7g085410.1 320 63.8 72.1 | GATA type zinc finger transcription factor family protein | HC | chr7:33076091-33074852 | 20130731
Soybean Glyma19g28650.1 325 65.2 72.8  
LJGI gnl|LJGI|TC78738 914 100.0 100.0 similar to UniRef100_A2Q5Q2 Cluster: Zinc finger, GATA-type; n=1; Medicago truncatula|Rep: Zinc finger, GATA-type - Medicago truncatula (Barrel medic), partial (72%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3964530.1 length: 274 aa.
IPR000679 Zinc finger, GATA-type
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00320 GATA 1e-13 200-234
HMMSmart SM00401 zinc 7.9e-15 194-244
PatternScan PS00344 GATA_ZN_FINGER_1 NA 200-225
ProfileScan PS50114 GATA_ZN_FINGER_2 11.095 198-230
IPR013088 Zinc finger, NHR/GATA-type
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.30.50.10 no description 1.2e-12 198-235
no_ID  
Coil coil coiled-coil NA 147-168
HMMPanther PTHR10071 TRANSCRIPTION 4.8e-38 174-263
HMMPanther PTHR10071:SF113ZINC FINGER 4.8e-38 174-263
Seg seg seg NA 154-182
superfamily SSF57716 Glucocorticoid 6.7e-20 194-259
Wolf-PSORT
Lj1g3v3964530.1	nucl 12, chlo 1, cyto 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3964530.1