Miyakogusa Predicted Gene

Lj1g3v3958310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1ML38_SOYBN 483 93.0 94.1 (tr|I1ML38) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G18230.1 440 88.0 90.8 | Symbols: | transcription regulator NOT2/NOT3/NOT5 family protein | chr5:6021610-6027031 REVERSE LENGTH=843
Medicago Medtr7g085350.2 462 89.1 92.2 | transcription regulator NOT2/NOT3/NOT5 family protein | HC | chr7:33041286-33054371 | 20130731
Soybean Glyma16g04690.2 483 93.0 94.1  
LJGI gnl|LJGI|TC60662 1275 100.0 100.0 homologue to UniRef100_A2Q5Q7 Cluster: Not CCR4-Not complex component, N-terminal; tRNA-binding arm; n=1; Medicago truncatula|Rep: Not CCR4-Not complex component, N-terminal; tRNA-binding arm - Medicago truncatula (Barrel medic), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3958310.1 length: 292 aa.
IPR007207 Not CCR4-Not complex component, N-terminal
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF04065 Not3 2.8e-78 3-236
no_ID  
Coil coil coiled-coil NA 41-62
132-160
HMMPanther PTHR23326 CCR4 4.2e-118 2-236
HMMPanther PTHR23326:SF0 SUBFAMILY 4.2e-118 2-236
Seg seg seg NA 218-228
258-291
Wolf-PSORT
Lj1g3v3958310.1	nucl 7, cyto 3, chlo 1, mito 1, plas 1, cysk 1, chlo_mito 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3958310.1