Miyakogusa Predicted Gene

Lj1g3v3946000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1ML53_SOYBN 366 74.2 80.2 (tr|I1ML53) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G18290.2 233 50.4 64.9 | Symbols: SIP1;2 | Aquaporin-like superfamily protein | chr5:6055198-6056407 REVERSE LENGTH=243
Medicago Medtr7g085070.1 363 75.4 80.7 | major intrinsic protein (MIP) family transporter | HC | chr7:32887703-32892758 | 20130731
Soybean Glyma16g04800.1 366 74.2 80.2  
LJGI gnl|LJGI|TC73438 587 100.0 100.0 similar to UniRef100_Q5VR89 Cluster: Aquaporin SIP1-1; n=1; Oryza sativa Japonica Group|Rep: Aquaporin SIP1-1 - Oryza sativa subsp. japonica (Rice), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3946000.1 length: 247 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 2.2e-16 6-25
58-82
97-116
143-161
174-196
214-234
HMMPanther PTHR19139 AQUAPORIN 7.2e-88 1-247
HMMPfam PF00230 MIP 1.8e-16 4-231
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 1.3e-36 5-245
superfamily SSF81338 Aquaporin-like 8.8e-33 1-246
no_ID  
HMMPanther PTHR19139:SF3 AQUAPORIN 7.2e-88 1-247
Seg seg seg NA 51-66
104-115
Putative transmembrane regions
  From To
TM segments
SOSUI		 7 29
49 71
154 176
212 234
Wolf-PSORT
Lj1g3v3946000.1	chlo 6, plas 4, extr 3, chlo_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3946000.1