Miyakogusa Predicted Gene
- Lj1g3v3944940.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
E3NYP1_SOYBN |
321 |
88.0 |
94.9 |
(tr|E3NYP1) Flowering locus T-like protein 1 OS=Glycine max GN=FTL1 PE=2 SV=1 |
| TAIR_pep |
AT1G65480.1 |
278 |
75.3 |
85.9 |
| Symbols: FT | PEBP (phosphatidylethanolamine-binding protein) family protein | chr1:24331510-24333689 FORWARD LENGTH=175 |
| Medicago |
Medtr7g084970.1 |
310 |
84.3 |
92.4 |
| flowering locus protein T | HC | chr7:32843544-32845635 | 20130731 |
| Soybean |
Glyma16g04840.1 |
318 |
88.2 |
95.3 |
|
| LJGI |
gnl|LJGI|GO011964 |
73.8 |
78.5 |
78.5 |
similar to UniRef100_A1BQ40 Cluster: Flowering locus T-like protein; n=1; Vitis vinifera|Rep: Flowering locus T-like protein - Vitis vinifera (Grape), partial (97%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3944940.1 |
length: 174 aa. |
| IPR001858 |
Phosphatidylethanolamine-binding, conserved site |
| method |
AccNumber |
shortName |
E-value |
location |
| PatternScan |
PS01220 |
PBP |
NA |
64-86 |
| IPR008914 |
Phosphatidylethanolamine-binding protein PEBP |
| Gene3D |
G3DSA:3.90.280.10 |
no description |
4.4e-65 |
3-170 |
| HMMPfam |
PF01161 |
PBP |
1.3e-23 |
26-161 |
| superfamily |
SSF49777 |
PEBP-like |
1.9e-57 |
11-167 |
| no_ID |
|
| HMMPanther |
PTHR11362 |
PHOSPHATIDYLETHANOLAMINE-BINDING |
1.5e-74 |
5-172 |
- Wolf-PSORT
Lj1g3v3944940.1 chlo 8, nucl 2, cyto 2, plas 2, cyto_nucl 2, nucl_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3944940.1 |
|