Miyakogusa Predicted Gene

Lj1g3v3943730.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MF69_SOYBN 694 69.7 83.5 (tr|K7MF69) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G26630.1 452 54.5 73.6 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:9791572-9792939 REVERSE LENGTH=455
Medicago Medtr7g084830.1 650 65.5 79.1 | PPR containing plant-like protein | HC | chr7:32742835-32744848 | 20130731
Soybean Glyma19g28260.1 580 69.4 83.1  
LJGI gnl|LJGI|GO012973 1318 99.1 99.1 weakly similar to UniRef100_A7R0D1 Cluster: Chromosome undetermined scaffold_304, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_304, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3943730.1 length: 478 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.004 161-186
293-319
HMMPfam PF12854 PPR_1 1.2e-06 188-215
HMMPfam PF13041 PPR_2 5.4e-11 85-132
217-264
319-366
HMMTigr TIGR00756 PPR: 1.9e-09 88-121
159-188
189-219
220-254
322-355
ProfileScan PS51375 PPR 7.552 86-120
218-252
187-217
156-186
253-287
319-353
288-318
354-389
no_ID  
HMMPanther PTHR24015 FAMILY 9.7e-154 21-448
HMMPanther PTHR24015:SF61 PGR3 9.7e-154 21-448
Wolf-PSORT
Lj1g3v3943730.1	chlo 5, cyto 3, pero 3, cyto_pero 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3943730.1