Miyakogusa Predicted Gene

Lj1g3v3930420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MF75_SOYBN 146 43.1 48.1 (tr|K7MF75) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G13910.1 101 53.0 58.0 | Symbols: LEP | Integrase-type DNA-binding superfamily protein | chr5:4482450-4483085 REVERSE LENGTH=211
Medicago Medtr7g084370.1 141 42.9 51.0 | AP2 domain class transcription factor | HC | chr7:32558339-32557164 | 20130731
Soybean Glyma16g05070.1 144 43.1 48.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3930420.1 length: 289 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 1.2e-08 33-44
55-71
Gene3D G3DSA:3.30.730.10 no description 2.6e-28 32-88
HMMPfam PF00847 AP2 3.4e-16 33-81
HMMSmart SM00380 DNA-binding 2.7e-34 32-95
ProfileScan PS51032 AP2_ERF 21.140 32-89
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 1.6e-22 31-92
no_ID  
HMMPanther PTHR31677 FAMILY 7.4e-27 32-113
HMMPanther PTHR31677:SF0 SUBFAMILY 7.4e-27 32-113
Seg seg seg NA 15-28
65-85
148-156
169-178
253-260
Putative transmembrane regions
  From To
TM segments
SOSUI		 241 263
266 288
Wolf-PSORT
Lj1g3v3930420.1	nucl 8, plas 4, cyto_nucl 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3930420.1