Miyakogusa Predicted Gene
- Lj1g3v3918060.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TGF5_SOYBN |
488 |
84.1 |
89.8 |
(tr|C6TGF5) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT1G31860.1 |
386 |
69.3 |
79.2 |
| Symbols: AT-IE, HISN2 | histidine biosynthesis bifunctional protein (HISIE) | chr1:11434250-11436530 REVERSE LENGTH=281 |
| Medicago |
Medtr7g084480.1 |
527 |
88.3 |
95.1 |
| histidine biosynthesis hisIE protein | HC | chr7:32611900-32616312 | 20130731 |
| Soybean |
Glyma16g05140.2 |
488 |
84.1 |
89.8 |
|
| LJGI |
gnl|LJGI|TC66999 |
1679 |
99.9 |
99.9 |
similar to UniRef100_A7PA48 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3918060.1 |
length: 283 aa. |
| IPR002496 |
Phosphoribosyl-AMP cyclohydrolase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0000105 |
histidine biosynthetic process |
|
|
| Molecular Function |
GO:0004635 |
phosphoribosyl-AMP cyclohydrolase activity |
|
|
| BlastProDom |
PD002610 |
Q5NBQ1_ORYSA_Q5NBQ1; |
4e-26 |
101-154 |
| HMMPfam |
PF01502 |
PRA-CH |
7.2e-29 |
78-151 |
| IPR008179 |
Phosphoribosyl-ATP pyrophosphohydrolase |
| Biological Process |
GO:0000105 |
histidine biosynthetic process |
|
|
| Molecular Function |
GO:0004636 |
phosphoribosyl-ATP diphosphatase activity |
|
|
| HMMTigr |
TIGR03188 |
histidine_hisI: |
1.1e-20 |
173-261 |
| IPR021130 |
Phosphoribosyl-ATP pyrophosphohydrolase-like |
| HMMPfam |
PF01503 |
PRA-PH |
8.7e-09 |
175-263 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
209-230 |
| Gene3D |
G3DSA:1.10.287.1080 |
no description |
0.00052 |
185-258 |
| HMMPanther |
PTHR21256 |
HISTIDINOL |
3e-137 |
48-276 |
| HMMPanther |
PTHR21256:SF5 |
AT-IE |
3e-137 |
48-276 |
| superfamily |
SSF101386 |
all-alpha |
1.5e-16 |
170-262 |
| superfamily |
SSF141734 |
HisI-like |
4.3e-32 |
48-156 |
- Wolf-PSORT
Lj1g3v3918060.1 chlo 5, nucl 5, cyto 2, mito 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3918060.1 |
|