Miyakogusa Predicted Gene

Lj1g3v3904640.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7KXA8_MEDTR 261 60.1 71.3 (tr|G7KXA8) Nuclear factor related to kappa-B-binding protein OS=Medicago truncatula GN=MTR_7g084170 PE=4 SV=1

TAIR_pep AT5G13950.2 93.6 30.3 45.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits to 145 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr5:4496196-4500206 REVERSE LENGTH=939

Medicago Medtr7g084170.1 261 60.1 71.3 | hypothetical protein | HC | chr7:32458921-32465350 | 20130731

Soybean Glyma02g07360.1 260 58.0 71.9

LJGI gnl|LJGI|TC76760 452 99.6 99.6 homologue to UniRef100_A3YZE5 Cluster: Ferrochelatase; n=1; Synechococcus sp. WH 5701|Rep: Ferrochelatase - Synechococcus sp. WH 5701, partial (5%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v3904640.1 length: 224 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 109-123
202-208

Wolf-PSORT

Lj1g3v3904640.1 nucl 12, chlo 1, extr 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v3904640.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7KXA8_MEDTR	261	60.1	71.3	(tr\|G7KXA8) Nuclear factor related to kappa-B-binding protein OS=Medicago truncatula GN=MTR_7g084170 PE=4 SV=1
TAIR_pep	AT5G13950.2	93.6	30.3	45.1	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits to 145 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). \| chr5:4496196-4500206 REVERSE LENGTH=939
Medicago	Medtr7g084170.1	261	60.1	71.3	\| hypothetical protein \| HC \| chr7:32458921-32465350 \| 20130731
Soybean	Glyma02g07360.1	260	58.0	71.9
LJGI	gnl\|LJGI\|TC76760	452	99.6	99.6	homologue to UniRef100_A3YZE5 Cluster: Ferrochelatase; n=1; Synechococcus sp. WH 5701\|Rep: Ferrochelatase - Synechococcus sp. WH 5701, partial (5%)

no_ID
Lj1g3v3904640.1				length: 224 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	109-123 202-208