Miyakogusa Predicted Gene

Lj1g3v3904370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KX96_MEDTR 1843 86.2 91.8 (tr|G7KX96) Lysosomal alpha-mannosidase OS=Medicago truncatula GN=MTR_7g084040 PE=4 SV=1
TAIR_pep AT3G26720.1 1549 74.3 85.1 | Symbols: | Glycosyl hydrolase family 38 protein | chr3:9816707-9823056 FORWARD LENGTH=1019
Medicago Medtr7g084040.1 1843 86.2 91.8 | glycoside hydrolase family 38 amine-terminal domain protein | HC | chr7:32401043-32391096 | 20130731
Soybean Glyma19g27660.1 1840 88.3 93.4  
LJGI gnl|LJGI|TC65951 1354 99.9 99.9 similar to UniRef100_P94078 Cluster: Alpha-mannosidase; n=1; Arabidopsis thaliana|Rep: Alpha-mannosidase - Arabidopsis thaliana (Mouse-ear cress), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3904370.1 length: 1021 aa.
IPR000602 Glycoside hydrolase family 38, N-terminal domain
method AccNumber shortName E-value location
Molecular Function GO:0004559 alpha-mannosidase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF01074 Glyco_hydro_38 1.4e-88 37-348
IPR011013 Galactose mutarotase-like domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0030246 carbohydrate binding    
superfamily SSF74650 Galactose 8.6e-146 445-1007
IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
superfamily SSF88713 Glycoside 8.7e-115 24-351
IPR011682 Glycosyl hydrolase family 38, C-terminal
Biological Process GO:0006013 mannose metabolic process    
Molecular Function GO:0015923 mannosidase activity    
HMMPfam PF07748 Glyco_hydro_38C 7.9e-102 487-1002
IPR013780 Glycosyl hydrolase, family 13, all-beta
Gene3D G3DSA:2.60.40.1180 no description 3.3e-39 459-604
IPR015341 Glycoside hydrolase, family 38, central domain
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF09261 Alpha-mann_mid 3.4e-20 354-427
HMMSmart SM00872 Alpha 1.4e-21 353-427
IPR027291 Glycoside hydrolase 38/57, N-terminal domain
Gene3D G3DSA:3.20.110.10 no description 3.5e-132 16-350
no_ID  
Gene3D G3DSA:1.20.1270.50 no description 7.7e-30 352-448
Gene3D G3DSA:2.60.40.1360 no description 9.2e-34 889-1008
Gene3D G3DSA:2.70.98.30 no description 1.2e-96 605-864
HMMPanther PTHR11607 ALPHA-MANNOSIDASE 0 5-1008
HMMPanther PTHR11607:SF3 LYSOSOMAL 0 5-1008
Seg seg seg NA 4-14
superfamily SSF88688 Families 3.2e-29 352-449
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
Wolf-PSORT
Lj1g3v3904370.1	extr 3, cyto 2, E.R. 2, pero 2, cyto_pero 2, cyto_E.R. 2, mito 1.5, cyto_nucl 1.5, E.R._vacu 1.5, mito_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3904370.1