Miyakogusa Predicted Gene

Lj1g3v3904350.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KX94_MEDTR 1068 75.5 83.9 (tr|G7KX94) RING finger protein OS=Medicago truncatula GN=MTR_7g084020 PE=4 SV=1
TAIR_pep AT3G26730.1 637 50.3 65.3 | Symbols: | RING/U-box superfamily protein | chr3:9823770-9827270 FORWARD LENGTH=772
Medicago Medtr7g084020.1 1068 75.5 83.9 | RING finger protein | HC | chr7:32376240-32370124 | 20130731
Soybean Glyma16g05310.1 949 72.9 82.3  
LJGI gnl|LJGI|TC70938 2678 99.7 99.7 similar to UniRef100_A7PA30 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3904350.1 length: 743 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 2.4e-05 228-274
ProfileScan PS50089 ZF_RING_2 11.575 228-274
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.1e-08 226-288
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 243-252
IPR018957 Zinc finger, C3HC4 RING-type
HMMPfam PF00097 zf-C3HC4 4.7e-05 228-274
no_ID  
HMMPanther PTHR12983 FAMILY 3.7e-256 2-743
HMMPanther PTHR12983:SF1 SUBFAMILY 3.7e-256 2-743
Seg seg seg NA 5-28
31-50
158-174
superfamily SSF57850 RING/U-box 2.7e-10 205-326
Wolf-PSORT
Lj1g3v3904350.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3904350.1