Miyakogusa Predicted Gene

Lj1g3v3904220.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP29_LOTJA 766 87.7 87.7 (tr|C0JP29) Putative basic helix-loop-helix protein BHLH23 OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT3G26744.4 387 63.5 70.3 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:9832953-9834790 REVERSE LENGTH=494
Medicago Medtr7g083900.3 393 58.4 63.6 | basic helix loop helix protein BHLH23 | HC | chr7:32316216-32319397 | 20130731
Soybean Glyma16g05390.1 399 77.6 83.0  
LJGI gnl|LJGI|TC69426 1233 99.7 99.7 similar to UniRef100_Q2HUL6 Cluster: Helix-loop-helix DNA-binding; n=1; Medicago truncatula|Rep: Helix-loop-helix DNA-binding - Medicago truncatula (Barrel medic), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3904220.1 length: 451 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 1e-14 267-322
HMMPfam PF00010 HLH 2.4e-09 267-309
HMMSmart SM00353 helix 4.2e-14 266-315
ProfileScan PS50888 BHLH 15.682 260-309
superfamily SSF47459 HLH, 9.3e-18 258-342
no_ID  
Coil coil coiled-coil NA 20-41
303-324
HMMPanther PTHR31945 FAMILY 5.4e-145 190-451
HMMPanther PTHR31945:SF0 SUBFAMILY 5.4e-145 190-451
Seg seg seg NA 5-17
22-33
45-50
117-128
131-142
Wolf-PSORT
Lj1g3v3904220.1	nucl 8.5, cyto_nucl 5.5, chlo 3, cyto 1.5, chlo_mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3904220.1