Miyakogusa Predicted Gene

Lj1g3v3902620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D2JTB9_MEDTR 375 55.8 66.6 (tr|D2JTB9) CONSTANS-like protein (Fragment) OS=Medicago truncatula PE=4 SV=1
TAIR_pep AT2G33500.1 157 32.6 46.4 | Symbols: | B-box type zinc finger protein with CCT domain | chr2:14188159-14190046 REVERSE LENGTH=402
Medicago Medtr7g083540.1 375 55.8 66.6 | zinc finger constans-like protein | HC | chr7:32135506-32130746 | 20130731
Soybean Glyma16g05540.1 334 51.1 62.4  
LJGI gnl|LJGI|GO024568 735 94.5 94.5 homologue to UniRef100_A7QUS4 Cluster: Chromosome chr1 scaffold_180, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_180, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3902620.1 length: 384 aa.
IPR000315 Zinc finger, B-box
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00336 B-Box-type 2.1e-07 1-47
ProfileScan PS50119 ZF_BBOX 9.371 1-47
no_ID  
HMMPanther PTHR31717 FAMILY 2.4e-22 3-95
HMMPanther PTHR31717:SF0 SUBFAMILY 2.4e-22 3-95
Seg seg seg NA 265-287
Wolf-PSORT
Lj1g3v3902620.1	nucl 12, cyto 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3902620.1