Miyakogusa Predicted Gene
- Lj1g3v3902600.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KW46_MEDTR |
723 |
85.1 |
90.4 |
(tr|G7KW46) BRO1 domain-containing protein BROX OS=Medicago truncatula GN=MTR_7g083110 PE=4 SV=1 |
| TAIR_pep |
AT5G14020.1 |
504 |
63.1 |
76.9 |
| Symbols: | Endosomal targeting BRO1-like domain-containing protein | chr5:4523730-4525819 REVERSE LENGTH=401 |
| Medicago |
Medtr7g083110.2 |
723 |
85.1 |
90.4 |
| endosomal targeting BRO1-like domain protein | HC | chr7:31923064-31926741 | 20130731 |
| Soybean |
Glyma16g05550.1 |
710 |
82.0 |
90.8 |
|
| LJGI |
gnl|LJGI|BP069735 |
638 |
100.0 |
100.0 |
similar to UniRef100_A7PA05 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3902600.1 |
length: 414 aa. |
| IPR004328 |
BRO1 domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.40.280 |
no description |
9e-18 |
46-316 |
| HMMPfam |
PF03097 |
BRO1 |
3.2e-23 |
46-345 |
| HMMSmart |
SM01041 |
BRO1-like |
2.9e-27 |
19-385 |
| ProfileScan |
PS51180 |
BRO1 |
12.197 |
4-414 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
302-310 |
- Wolf-PSORT
Lj1g3v3902600.1 chlo 7, mito 2.5, cyto 2, cyto_mito 2, nucl 1, cysk 1, cysk_nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3902600.1 |
|