Miyakogusa Predicted Gene
- Lj1g3v3891930.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
F6LPV1_MEDTR |
58.5 |
70.2 |
72.3 |
(tr|F6LPV1) RopGEF8 OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT3G24620.1 |
54.3 |
70.0 |
72.5 |
| Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotide exchange factor 8 | chr3:8980695-8982793 REVERSE LENGTH=523 |
| Medicago |
Medtr6g087700.1 |
58.5 |
70.2 |
72.3 |
| RHO guanyl-nucleotide exchange factor | HC | chr6:32999908-32996320 | 20130731 |
| Soybean |
Glyma09g32450.1 |
58.2 |
70.2 |
72.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3891930.3 |
length: 58 aa. |
| IPR005512 |
Plant specific Rop nucleotide exchanger, PRONE |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005089 |
Rho guanyl-nucleotide exchange factor activity |
|
|
| HMMPfam |
PF03759 |
PRONE |
8.8e-10 |
3-40 |
| ProfileScan |
PS51334 |
PRONE |
14.842 |
1-58 |
- Wolf-PSORT
Lj1g3v3891930.3 plas 3.5, cyto 3, mito 3, nucl_plas 3, chlo 2, cyto_pero 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3891930.3 |
|