Miyakogusa Predicted Gene
- Lj1g3v3848490.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SB44_LOTJA |
303 |
100.0 |
100.0 |
(tr|I3SB44) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G19400.1 |
213 |
66.4 |
82.2 |
| Symbols: | Profilin family protein | chr4:10581037-10581909 REVERSE LENGTH=148 |
| Medicago |
Medtr7g115470.1 |
248 |
83.4 |
91.0 |
| profilin | HC | chr7:47723219-47720909 | 20130731 |
| Soybean |
Glyma03g40990.1 |
282 |
91.7 |
96.6 |
|
| LJGI |
gnl|LJGI|TC61796 |
846 |
99.8 |
99.8 |
similar to UniRef100_A7QKQ0 Cluster: Chromosome chr2 scaffold_113, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_113, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3848490.1 |
length: 147 aa. |
| IPR005455 |
Profilin |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003779 |
actin binding |
|
|
| Biological Process |
GO:0030036 |
actin cytoskeleton organization |
|
|
| HMMPfam |
PF00235 |
Profilin |
7.3e-08 |
10-129 |
| superfamily |
SSF55770 |
Profilin |
1.7e-11 |
9-147 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.450.30 |
no description |
2.1e-08 |
43-134 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
101 |
123 |
- Wolf-PSORT
Lj1g3v3848490.1 mito 6, nucl 4, cyto 1, plas 1, extr 1, cysk 1, cysk_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3848490.1 |
|