Miyakogusa Predicted Gene

Lj1g3v3847260.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7L290_MEDTR 1160 84.1 89.2 (tr|G7L290) Yellow stripe-like protein 1.1 OS=Medicago truncatula GN=MTR_7g028250 PE=4 SV=1
TAIR_pep AT3G27020.1 1050 76.0 85.4 | Symbols: YSL6 | YELLOW STRIPE like 6 | chr3:9961623-9964461 REVERSE LENGTH=676
Medicago Medtr7g028250.1 1160 84.1 89.2 | OPT family oligopeptide transporter | HC | chr7:9531538-9523159 | 20130731
Soybean Glyma16g05850.1 1159 84.8 90.4  
LJGI gnl|LJGI|FS344292 573 99.7 99.7 similar to UniRef100_Q6R3K8 Cluster: Probable metal-nicotianamine transporter YSL4; n=1; Arabidopsis thaliana|Rep: Probable metal-nicotianamine transporter YSL4 - Arabidopsis thaliana (Mouse-ear cress), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3847260.1 length: 677 aa.
IPR004813 Oligopeptide transporter, OPT superfamily
method AccNumber shortName E-value location
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03169 OPT 4e-132 39-658
HMMTigr TIGR00728 OPT_sfam: 5.6e-112 38-654
no_ID  
HMMPanther PTHR31645 FAMILY 0 6-676
HMMPanther PTHR31645:SF0 SUBFAMILY 0 6-676
Seg seg seg NA 121-128
162-176
224-237
Putative transmembrane regions
  From To
TM segments
SOSUI
39 61
73 95
109 131
157 178
218 240
270 292
323 345
403 425
467 489
506 528
566 588
608 629
643 665
Wolf-PSORT
Lj1g3v3847260.1	plas 9, E.R. 3, cyto 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3847260.1