Miyakogusa Predicted Gene

Lj1g3v3847240.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L383_MEDTR 401 85.0 88.0 (tr|G7L383) ABC transporter I family member OS=Medicago truncatula GN=MTR_7g028600 PE=4 SV=1
TAIR_pep AT5G14100.1 328 70.6 76.6 | Symbols: ATNAP14, NAP14 | non-intrinsic ABC protein 14 | chr5:4549706-4551632 REVERSE LENGTH=278
Medicago Medtr7g028600.3 401 85.0 88.0 | ABC transporter family protein (ATP-binding component) | HC | chr7:9784282-9778941 | 20130731
Soybean Glyma19g26470.1 351 82.9 86.3  
LJGI gnl|LJGI|TC76001 844 100.0 100.0 similar to UniRef100_A7P9X1 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3847240.1 length: 276 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.9e-16 90-219
ProfileScan PS50893 ABC_TRANSPORTER_2 16.887 49-274
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 6.7e-08 75-267
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.5e-47 51-267
no_ID  
Gene3D G3DSA:3.40.50.300 no description 8.1e-49 49-266
HMMPanther PTHR24220 FAMILY 1.2e-106 45-271
HMMPanther PTHR24220:SF40 SUBFAMILY 1.2e-106 45-271
Seg seg seg NA 7-40
230-246
Wolf-PSORT
Lj1g3v3847240.1	chlo 11, nucl 1, mito 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3847240.1