Miyakogusa Predicted Gene

Lj1g3v3834240.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KNL8_MEDTR 181 63.0 72.6 (tr|G7KNL8) Calcium-binding protein CML38 OS=Medicago truncatula GN=MTR_6g023460 PE=4 SV=1
TAIR_pep AT3G01830.1 103 41.3 59.4 | Symbols: | Calcium-binding EF-hand family protein | chr3:296114-296554 FORWARD LENGTH=146
Medicago Medtr6g023460.1 181 63.0 72.6 | EF hand calcium-binding family protein | HC | chr6:8205659-8204905 | 20130731
Soybean Glyma16g06390.1 159 67.4 73.6  
LJGI gnl|LJGI|TC70122 868 99.8 99.8 similar to UniRef100_A7PLR6 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (70%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3834240.1 length: 146 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 EF-hand, 0.17 8-36
48-76
84-112
120-146
ProfileScan PS50222 EF_HAND_2 14.458 4-39
44-79
80-115
116-146
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 8.5e-23 9-63
64-145
HMMPfam PF13499 EF_hand_5 2.8e-12 12-72
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 17-29
57-69
129-141
no_ID  
HMMPanther PTHR10891 EF-HAND 4.8e-53 1-146
HMMPanther PTHR10891:SF291SUBFAMILY NOT 4.8e-53 1-146
HMMPfam PF13833 EF_hand_6 7.4e-15 97-145
Seg seg seg NA 38-55
56-68
superfamily SSF47473 EF-hand 3.7e-35 4-145
Wolf-PSORT
Lj1g3v3834240.1	chlo 8, cyto 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3834240.1