Miyakogusa Predicted Gene

Lj1g3v3834020.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3S460_LOTJA 188 47.7 62.3 (tr|I3S460) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G56820.1 70.5 25.8 42.8 | Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr5:22976334-22977838 FORWARD LENGTH=435

Medicago Medtr7g056287.1 135 40.9 56.7 | F-box/RNI/FBD-like domain protein | LC | chr7:19776999-19775629 | 20130731

Soybean Glyma08g46320.1 122 37.6 58.1

LJGI gnl|LJGI|TC82244 71.9 87.5 87.5

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v3834020.1 length: 212 aa.

IPR006566 FBD

method AccNumber shortName E-value location

HMMPfam PF08387 FBD 2.1e-11 134-181

HMMSmart SM00579 domain 3.4e-10 140-212

Wolf-PSORT

Lj1g3v3834020.1 nucl 11, cyto 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v3834020.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3S460_LOTJA	188	47.7	62.3	(tr\|I3S460) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G56820.1	70.5	25.8	42.8	\| Symbols: \| F-box/RNI-like/FBD-like domains-containing protein \| chr5:22976334-22977838 FORWARD LENGTH=435
Medicago	Medtr7g056287.1	135	40.9	56.7	\| F-box/RNI/FBD-like domain protein \| LC \| chr7:19776999-19775629 \| 20130731
Soybean	Glyma08g46320.1	122	37.6	58.1
LJGI	gnl\|LJGI\|TC82244	71.9	87.5	87.5

IPR006566	FBD
Lj1g3v3834020.1				length: 212 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF08387	FBD	2.1e-11	134-181
HMMSmart	SM00579	domain	3.4e-10	140-212