Miyakogusa Predicted Gene

Lj1g3v3751710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MLQ8_SOYBN 470 87.9 93.0 (tr|I1MLQ8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G40650.1 437 81.3 88.0 | Symbols: SDH2-2 | succinate dehydrogenase 2-2 | chr5:16281462-16283296 FORWARD LENGTH=280
Medicago Medtr0018s0260.1 464 85.8 90.9 | succinate dehydrogenase [ubiquinone] iron-sulfur subunit | HC | scaffold0018:155379-159912 | 20130731
Soybean Glyma16g07150.1 470 87.9 93.0  
LJGI gnl|LJGI|TC61712 1651 99.9 99.9 similar to UniRef100_Q8LB02 Cluster: Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial precursor; n=1; Arabidopsis thaliana|Rep: Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial precursor - Arabidopsis thaliana (Mouse-ear cress), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3751710.1 length: 278 aa.
IPR001041 2Fe-2S ferredoxin-type domain
method AccNumber shortName E-value location
Molecular Function GO:0009055 electron carrier activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
ProfileScan PS51085 2FE2S_FER_2 9.404 60-138
superfamily SSF54292 2Fe-2S 4.8e-33 42-147
IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein
Biological Process GO:0006099 tricarboxylic acid cycle    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR00384 dhsB: 1.9e-82 51-272
IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site
Molecular Function GO:0051537 2 iron, 2 sulfur cluster binding    
PatternScan PS00197 2FE2S_FER_1 NA 99-107
IPR009051 Alpha-helical ferredoxin
Molecular Function GO:0051536 iron-sulfur cluster binding    
superfamily SSF46548 alpha-helical 1.4e-38 148-278
IPR012285 Fumarate reductase, C-terminal
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:1.10.1060.10 no description 4.2e-51 148-275
IPR012675 Beta-grasp domain
Gene3D G3DSA:3.10.20.30 no description 3.9e-41 39-147
IPR017896 4Fe-4S ferredoxin-type, iron-sulpur binding domain
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMPfam PF13183 Fer4_8 4.8e-08 188-260
ProfileScan PS51379 4FE4S_FER_2 7.760 181-211
IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
PatternScan PS00198 4FE4S_FER_1 NA 191-202
IPR025192 Succinate dehydogenase/fumarate reductase N-terminal
Molecular Function GO:0009055 electron carrier activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMPfam PF13085 Fer2_3 3.4e-32 48-152
no_ID  
HMMPanther PTHR11921 SUCCINATE 5.4e-137 28-272
Seg seg seg NA 2-24
Wolf-PSORT
Lj1g3v3751710.1	mito 7.5, cyto_mito 4.5, chlo 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3751710.1