Miyakogusa Predicted Gene

Lj1g3v3740580.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7MFI0_SOYBN 665 81.8 89.0 (tr|K7MFI0) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G01720.1 505 64.6 75.5 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | chr3:262412-265608 REVERSE LENGTH=802

Medicago Medtr0044s0180.1 647 79.9 88.0 | peptidyl serine alpha-galactosyltransferase | HC | scaffold0044:58032-50900 | 20130731

Soybean Glyma05g06390.1 600 76.2 83.9

LJGI gnl|LJGI|FS345597 137 100.0 100.0 similar to UniRef100_A9M2Q3 Cluster: Peptide chain release factor 3; n=1; Neisseria meningitidis 053442|Rep: Peptide chain release factor 3 - Neisseria meningitidis 053442, partial (4%)

Putative transmembrane regions

From To

TM segments
SOSUI 341 363

Wolf-PSORT

Lj1g3v3740580.1 cyto 3, mito 3, chlo 2, nucl 2, golg 2, mito_plas 2, cyto_E.R. 2, cyto_plas 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v3740580.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7MFI0_SOYBN	665	81.8	89.0	(tr\|K7MFI0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G01720.1	505	64.6	75.5	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). \| chr3:262412-265608 REVERSE LENGTH=802
Medicago	Medtr0044s0180.1	647	79.9	88.0	\| peptidyl serine alpha-galactosyltransferase \| HC \| scaffold0044:58032-50900 \| 20130731
Soybean	Glyma05g06390.1	600	76.2	83.9
LJGI	gnl\|LJGI\|FS345597	137	100.0	100.0	similar to UniRef100_A9M2Q3 Cluster: Peptide chain release factor 3; n=1; Neisseria meningitidis 053442\|Rep: Peptide chain release factor 3 - Neisseria meningitidis 053442, partial (4%)