Miyakogusa Predicted Gene

Lj1g3v3740560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MFJ4_SOYBN 989 79.5 88.2 (tr|K7MFJ4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G46610.1 738 60.0 73.5 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr3:17160224-17162221 REVERSE LENGTH=665
Medicago Medtr2g036560.1 125 22.0 40.9 | PPR containing plant-like protein | HC | chr2:15824637-15820871 | 20130731
Soybean Glyma16g07160.1 1061 67.9 75.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3740560.1 length: 738 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0086 180-208
497-524
HMMPfam PF13041 PPR_2 8.7e-14 253-293
527-571
599-646
HMMTigr TIGR00756 PPR: 0.00047 180-211
255-288
497-528
530-564
600-634
635-668
ProfileScan PS51375 PPR 10.095 177-211
253-287
218-252
288-318
416-450
458-492
493-527
528-562
563-597
598-632
633-667
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.1e-07 493-662
no_ID  
HMMPanther PTHR24015 FAMILY 4e-71 180-676
Seg seg seg NA 122-140
320-334
superfamily SSF48452 TPR-like 6.3e-06 253-593
Wolf-PSORT
Lj1g3v3740560.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3740560.1