Miyakogusa Predicted Gene

Lj1g3v3716950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K6H8_MEDTR 642 91.5 96.1 (tr|G7K6H8) Exportin-1 OS=Medicago truncatula GN=MTR_5g007790 PE=4 SV=1
TAIR_pep AT5G17020.1 600 86.7 92.7 | Symbols: XPO1A, ATCRM1, ATXPO1, XPO1, HIT2 | exportin 1A | chr5:5594904-5602467 FORWARD LENGTH=1075
Medicago Medtr5g007790.1 643 91.5 96.1 | chromosome region maintenance protein 1/exportin | HC | chr5:1516370-1530958 | 20130731
Soybean Glyma11g09780.1 640 91.5 95.8  
LJGI gnl|LJGI|TC58256 729 88.0 88.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3716950.1 length: 350 aa.
IPR011989 Armadillo-like helical
method AccNumber shortName E-value location
Gene3D G3DSA:1.25.10.10 no description 1e-64 179-340
IPR014877 CRM1 C-terminal domain
HMMPfam PF08767 CRM1_C 2.7e-65 180-340
HMMSmart SM01102 CRM1 1.1e-56 180-345
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.1e-54 178-344
no_ID  
HMMPanther PTHR11223 EXPORTIN 2.5e-215 17-340
HMMPanther PTHR11223:SF2 EXPORTIN 2.5e-215 17-340
Putative transmembrane regions
  From To
TM segments
SOSUI		 321 343
Wolf-PSORT
Lj1g3v3716950.1	chlo 4, plas 2, vacu 2, chlo_mito 2, nucl 1, cyto 1, extr 1, E.R. 1, pero 1, golg 1, cyto_nucl 1, cyto_pero 1, cysk_plas 1, mito_plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3716950.1