Miyakogusa Predicted Gene

Lj1g3v3704970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S5C7_LOTJA 433 92.5 92.9 (tr|I3S5C7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G53580.1 350 72.1 81.9 | Symbols: | diaminopimelate epimerase family protein | chr3:19864784-19866907 FORWARD LENGTH=362
Medicago Medtr7g100345.1 390 84.1 89.4 | diaminopimelate epimerase | HC | chr7:40253124-40246864 | 20130731
Soybean Glyma19g35780.1 412 86.3 91.2  
LJGI gnl|LJGI|TC62002 1350 100.0 100.0 similar to UniRef100_A7PSY2 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3704970.1 length: 226 aa.
IPR001653 Diaminopimelate epimerase, DapF
method AccNumber shortName E-value location
Molecular Function GO:0008837 diaminopimelate epimerase activity    
Biological Process GO:0009089 lysine biosynthetic process via diaminopimelate    
HMMPfam PF01678 DAP_epimerase 6.9e-31 1-65
98-219
HMMTigr TIGR00652 DapF: 1.3e-71 1-224
IPR018510 Diaminopimelate epimerase, active site
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0008837 diaminopimelate epimerase activity    
Biological Process GO:0009089 lysine biosynthetic process via diaminopimelate    
PatternScan PS01326 DAP_EPIMERASE NA 5-19
no_ID  
Gene3D G3DSA:3.10.310.10 no description 1e-54 1-60
61-214
HMMPanther PTHR31689 FAMILY 3.5e-111 1-226
HMMPanther PTHR31689:SF0 SUBFAMILY 3.5e-111 1-226
Seg seg seg NA 162-176
superfamily SSF54506 Diaminopimelate 2.5e-21 77-226
1-72
Wolf-PSORT
Lj1g3v3704970.1	cyto 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3704970.1