Miyakogusa Predicted Gene

Lj1g3v3690180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D0VY45_LOTJA 955 86.1 89.0 (tr|D0VY45) Homocitrate synthase OS=Lotus japonicus GN=Fen1 PE=2 SV=1
TAIR_pep AT1G74040.1 732 64.8 79.1 | Symbols: IMS1, MAML-3, IPMS2 | 2-isopropylmalate synthase 1 | chr1:27842258-27845566 FORWARD LENGTH=631
Medicago Medtr1g116500.1 773 70.5 79.7 | 2-isopropylmalate synthase | HC | chr1:52692665-52700783 | 20130731
Soybean Glyma20g38950.3 783 71.0 81.5  
LJGI gnl|LJGI|TC77515 1455 94.2 94.2 similar to UniRef100_Q39891 Cluster: Probable 2-isopropylmalate synthase; n=1; Glycine max|Rep: Probable 2-isopropylmalate synthase - Glycine max (Soybean), partial (56%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3690180.1 length: 547 aa.
IPR000891 Pyruvate carboxyltransferase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF00682 HMGL-like 9.5e-72 39-285
ProfileScan PS50991 PYR_CT 41.134 31-304
IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
PatternScan PS00815 AIPM_HOMOCIT_SYNTH_1 NA 38-54
PatternScan PS00816 AIPM_HOMOCIT_SYNTH_2 NA 234-247
IPR005671 2-isopropylmalate synthase, bacterial-type
Molecular Function GO:0003852 2-isopropylmalate synthase activity    
Biological Process GO:0009098 leucine biosynthetic process    
HMMTigr TIGR00973 leuA_bact: 1.3e-186 31-540
IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Molecular Function GO:0003852 2-isopropylmalate synthase activity    
Biological Process GO:0009098 leucine biosynthetic process    
HMMPfam PF08502 LeuA_dimer 3e-35 410-543
HMMSmart SM00917 LeuA 7.2e-22 409-543
superfamily SSF110921 2-isopropylmalate 7.1e-18 430-543
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.70 no description 7.2e-142 16-387
no_ID  
Coil coil coiled-coil NA 374-395
HMMPanther PTHR10277 HOMOCITRATE 2e-250 14-545
HMMPanther PTHR10277:SF9 2-ISOPROPYLMALATE 2e-250 14-545
Seg seg seg NA 519-532
superfamily SSF51569 Aldolase 7.4e-89 28-328
Wolf-PSORT
Lj1g3v3690180.1	cyto 8, mito 3, nucl 1, pero 1, cysk 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3690180.1