Miyakogusa Predicted Gene
- Lj1g3v3690130.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
I3SEY1_LOTJA |
190 |
81.4 |
82.3 |
(tr|I3SEY1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
TAIR_pep |
AT5G13750.2 |
107 |
50.0 |
60.2 |
| Symbols: ZIFL1 | zinc induced facilitator-like 1 | chr5:4438896-4441289 FORWARD LENGTH=392 |
Medicago |
Medtr8g042780.1 |
159 |
69.9 |
73.5 |
| zinc induced facilitator-like protein | HC | chr8:16530996-16525894 | 20130731 |
Soybean |
Glyma13g25600.4 |
147 |
61.9 |
69.0 |
|
LJGI |
gnl|LJGI|TC60642 |
414 |
90.5 |
90.5 |
similar to UniRef100_A7QAL1 Cluster: Chromosome undetermined scaffold_71, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_71, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3690130.1 |
length: 113 aa. |
IPR011701 |
Major facilitator superfamily |
method |
AccNumber |
shortName |
E-value |
location |
Cellular Component |
GO:0016021 |
integral to membrane |
|
|
Biological Process |
GO:0055085 |
transmembrane transport |
|
|
HMMPfam |
PF07690 |
MFS_1 |
2.3e-10 |
2-108 |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
superfamily |
SSF103473 |
MFS |
6e-13 |
1-108 |
IPR020846 |
Major facilitator superfamily domain |
ProfileScan |
PS50850 |
MFS |
12.845 |
1-113 |
no_ID |
|
Gene3D |
G3DSA:1.20.1250.20 |
no description |
7.7e-14 |
1-106 |
HMMPanther |
PTHR24003 |
MAJOR |
1.2e-21 |
1-109 |
HMMPanther |
PTHR24003:SF69 |
SUBFAMILY |
1.2e-21 |
1-109 |
Seg |
seg |
seg |
NA |
41-58 |
- Putative transmembrane regions
|
From |
To |
TM segments
SOSUI |
3 |
25 |
33 |
55 |
78 |
100 |
- Wolf-PSORT
Lj1g3v3690130.1 vacu 3, nucl 2, cyto 2, extr 2, E.R. 2, cyto_nucl 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj1g3v3690130.1 |
|