Miyakogusa Predicted Gene
- Lj1g3v3648750.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TN86_SOYBN |
178 |
61.7 |
74.5 |
(tr|C6TN86) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT5G40510.1 |
109 |
42.3 |
53.5 |
| Symbols: | Sucrase/ferredoxin-like family protein | chr5:16229277-16230798 FORWARD LENGTH=333 |
| Medicago |
Medtr7g033625.1 |
143 |
54.1 |
65.1 |
| sucrase/ferredoxin family protein | HC | chr7:12217674-12212734 | 20130731 |
| Soybean |
Glyma19g10120.1 |
178 |
61.7 |
74.5 |
|
| LJGI |
gnl|LJGI|TC58539 |
850 |
100.0 |
100.0 |
similar to UniRef100_A7PM27 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (65%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3648750.1 |
length: 141 aa. |
| IPR009737 |
Sucraseferredoxin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF06999 |
Suc_Fer-like |
1e-08 |
3-36 |
| IPR012336 |
Thioredoxin-like fold |
| Gene3D |
G3DSA:3.40.30.10 |
no description |
7.5e-09 |
3-37 |
| superfamily |
SSF52833 |
Thioredoxin-like |
4.8e-08 |
3-41 |
| no_ID |
|
| HMMPanther |
PTHR31902 |
FAMILY |
1.2e-27 |
1-141 |
| Seg |
seg |
seg |
NA |
120-133 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
115 |
136 |
- Wolf-PSORT
Lj1g3v3648750.1 cyto 6, chlo 4, extr 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3648750.1 |
|