Miyakogusa Predicted Gene

Lj1g3v3642040.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K9Q6_MEDTR 454 43.1 56.6 (tr|G7K9Q6) Disease resistance-like protein OS=Medicago truncatula GN=MTR_5g038180 PE=4 SV=1
TAIR_pep AT5G17680.1 246 32.8 48.6 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr5g038180.1 463 44.9 58.5 | disease resistance protein | LC | chr5:16688804-16694793 | 20130731
Soybean Glyma19g07650.1 422 41.8 57.2  
LJGI gnl|LJGI|TC76008 2407 99.9 99.9 weakly similar to UniRef100_Q8W2C0 Cluster: Functional candidate resistance protein KR1; n=1; Glycine max|Rep: Functional candidate resistance protein KR1 - Glycine max (Soybean), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3642040.2 length: 671 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 1.3e-10 64-131
HMMSmart SM00255 Toll 0.00047 17-153
ProfileScan PS50104 TIR 10.200 62-123
superfamily SSF52200 Toll/Interleukin 2.6e-16 6-156
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 1.5e-16 216-231
297-311
390-404
564-580
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 2.8e-33 199-460
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 0.00051 213-356
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.6e-21 183-427
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 1.4e-05 58-123
Gene3D G3DSA:3.40.50.300 no description 2.2e-11 213-371
HMMPanther PTHR11017 LEUCINE-RICH 1.2e-96 33-612
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1.2e-96 33-612
Seg seg seg NA 211-229
superfamily SSF46785 "Winged 5.8e-20 425-533
superfamily SSF52058 L 2.8e-06 530-645
Wolf-PSORT
Lj1g3v3642040.2	chlo 7.5, chlo_mito 5.33333, mito 2, cyto_mito 1.83333, nucl 1, cyto 1, plas 1, extr 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3642040.2