Miyakogusa Predicted Gene

Lj1g3v3598300.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KYX5_SOYBN 600 75.7 81.9 (tr|I1KYX5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G60870.1 473 58.8 72.2 | Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr5:24485788-24487771 REVERSE LENGTH=445
Medicago Medtr7g451760.1 414 74.5 82.1 | chromosome condensation regulator RCC1 repeat protein | HC | chr7:17632336-17635517 | 20130731
Soybean Glyma08g45650.1 600 75.7 81.9  
LJGI gnl|LJGI|TC72440 1265 99.2 99.2 similar to UniRef100_A2Q2N3 Cluster: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; n=1; Medicago truncatula|Rep: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II - Medicago truncatula (Barrel medic), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3598300.2 length: 448 aa.
IPR000408 Regulator of chromosome condensation, RCC1
method AccNumber shortName E-value location
FPrintScan PR00633 RCCNDNSATION 2.5e-14 48-64
119-135
155-171
171-185
272-290
330-351
HMMPfam PF00415 RCC1 6.3e-06 48-76
118-165
169-217
282-331
334-383
386-442
PatternScan PS00626 RCC1_2 NA 321-331
432-442
ProfileScan PS50012 RCC1_3 12.554 119-168
169-220
225-282
283-334
335-386
387-445
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Gene3D G3DSA:2.130.10.30 no description 5.6e-84 118-443
superfamily SSF50985 RCC1/BLIP-II 4.2e-77 118-442
no_ID  
HMMPanther PTHR22870 REGULATOR 6.5e-203 29-442
HMMPanther PTHR22870:SF88 REGULATOR 6.5e-203 29-442
Seg seg seg NA 14-34
35-45
125-135
230-248
341-351
Wolf-PSORT
Lj1g3v3598300.2	chlo 6, mito 4.5, cyto_mito 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3598300.2