Miyakogusa Predicted Gene
- Lj1g3v3594930.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SBF7_LOTJA |
188 |
88.8 |
88.8 |
(tr|I3SBF7) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT5G48485.1 |
77.8 |
49.4 |
61.0 |
| Symbols: DIR1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:19646317-19646625 REVERSE LENGTH=102 |
| Medicago |
Medtr7g052640.1 |
134 |
76.5 |
87.1 |
| Nodule Cysteine-Rich (NCR) secreted peptide | HC | chr7:18510625-18509814 | 20130731 |
| Soybean |
Glyma18g26120.1 |
140 |
82.4 |
91.8 |
|
| LJGI |
gnl|LJGI|TC71498 |
642 |
100.0 |
100.0 |
similar to UniRef100_A7R856 Cluster: Chromosome undetermined scaffold_2286, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_2286, whole genome shotgun sequence - Vitis vinifera (Grape), partial (77%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3594930.1 |
length: 107 aa. |
| IPR016140 |
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14368 |
LTP_2 |
3.9e-12 |
19-107 |
| HMMSmart |
SM00499 |
Plant |
0.0007 |
35-107 |
| superfamily |
SSF47699 |
Bifunctional |
4.3e-14 |
33-104 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.110.10 |
no description |
7.5e-07 |
41-104 |
| Seg |
seg |
seg |
NA |
11-22 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
10 |
32 |
- Wolf-PSORT
Lj1g3v3594930.1 extr 9, vacu 2, chlo 1, nucl 1, plas 1, nucl_plas 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3594930.1 |
|