Miyakogusa Predicted Gene

Lj1g3v3590740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S130_LOTJA 877 95.4 95.6 (tr|I3S130) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G07360.1 500 56.3 72.9 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:2354884-2356613 FORWARD LENGTH=460
Medicago Medtr7g053260.1 667 73.0 84.3 | plant U-box protein | HC | chr7:18729058-18725963 | 20130731
Soybean Glyma18g31330.1 684 74.4 85.0  
LJGI gnl|LJGI|TC59869 1316 99.9 99.9 similar to UniRef100_A7R207 Cluster: Chromosome undetermined scaffold_390, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_390, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3590740.1 length: 453 aa.
IPR003613 U box domain
method AccNumber shortName E-value location
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 2.7e-23 73-142
HMMSmart SM00504 Modified 1.4e-30 75-138
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 2e-28 174-442
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.9e-32 72-143
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 3.5e-29 154-443
no_ID  
HMMPanther PTHR23315 BETA 9.1e-95 96-449
HMMPanther PTHR23315:SF14 ANKYRIN 9.1e-95 96-449
HMMPfam PF05804 KAP 2.6e-05 231-405
Seg seg seg NA 48-66
superfamily SSF57850 RING/U-box 1.2e-26 54-151
Wolf-PSORT
Lj1g3v3590740.1	cyto 8, chlo 2, nucl 2, mito 1, vacu 1, cysk_nucl 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3590740.1