Miyakogusa Predicted Gene
- Lj1g3v3580460.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
I1N201_SOYBN |
1056 |
90.4 |
93.2 |
(tr|I1N201) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
TAIR_pep |
AT3G25140.1 |
914 |
86.1 |
92.9 |
| Symbols: GAUT8, QUA1 | Nucleotide-diphospho-sugar transferases superfamily protein | chr3:9154748-9156642 FORWARD LENGTH=559 |
Medicago |
Medtr7g057530.1 |
852 |
93.1 |
94.9 |
| glycosyltransferase Quasimodo protein, putative | HC | chr7:20725144-20723189 | 20130731 |
Soybean |
Glyma08g46210.1 |
1052 |
89.6 |
93.0 |
|
LJGI |
gnl|LJGI|TC59044 |
3326 |
99.9 |
99.9 |
similar to UniRef100_A7PAH6 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (76%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3580460.1 |
length: 560 aa. |
IPR002495 |
Glycosyl transferase, family 8 |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0016757 |
transferase activity, transferring glycosyl groups |
|
|
HMMPfam |
PF01501 |
Glyco_transf_8 |
1.4e-69 |
257-533 |
no_ID |
|
Coil |
coil |
coiled-coil |
NA |
179-200 |
Gene3D |
G3DSA:3.90.550.10 |
no description |
3.5e-70 |
355-556 |
HMMPanther |
PTHR32116 |
FAMILY |
0 |
64-560 |
HMMPanther |
PTHR32116:SF10 |
SUBFAMILY |
0 |
64-560 |
Seg |
seg |
seg |
NA |
258-269 |
superfamily |
SSF53448 |
Nucleotide-diphospho-sugar |
1.4e-67 |
250-560 |
- Putative transmembrane regions
|
From |
To |
TM segments
SOSUI |
17 |
39 |
- Wolf-PSORT
Lj1g3v3580460.1 mito 8.5, cyto_mito 5, chlo 1, cyto 1, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj1g3v3580460.1 |
|