Miyakogusa Predicted Gene

Lj1g3v3557080.3

Related links:

GeneModel
LORE1 insertion

Predicted Sequence Links:

Translated sequence
Nucleotide sequence

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep --No_Hits--

Medicago --No_Hits--

Soybean --No_Hits--

LJGI gnl|LJGI|TC65183 196 91.0 91.0 weakly similar to UniRef100_Q9LNG6 Cluster: F21D18.14; n=1; Arabidopsis thaliana|Rep: F21D18.14 - Arabidopsis thaliana (Mouse-ear cress), partial (35%)

Putative transmembrane regions

From To

TM segments
SOSUI 14 36

47 69

71 90

Wolf-PSORT

Lj1g3v3557080.3 cyto 4, chlo 3, cyto_nucl 3, cyto_plas 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v3557080.3

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	--No_Hits--
Medicago	--No_Hits--
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|TC65183	196	91.0	91.0	weakly similar to UniRef100_Q9LNG6 Cluster: F21D18.14; n=1; Arabidopsis thaliana\|Rep: F21D18.14 - Arabidopsis thaliana (Mouse-ear cress), partial (35%)