Miyakogusa Predicted Gene

Lj1g3v3556950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MSA9_SOYBN 325 45.3 61.5 (tr|I1MSA9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G06040.1 274 38.8 56.7 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins in 240 species: Archae - 0; Bacteria - 125; Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). | chr2:2352333-2355419 REVERSE LENGTH=762
Medicago Medtr4g125440.1 300 42.3 59.2 | RNI superfamily protein | HC | chr4:52012520-52008004 | 20130731
Soybean Glyma17g05740.1 325 45.3 61.5  
LJGI gnl|LJGI|FS323291 1261 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3556950.1 length: 450 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 82 168-193
194-219
220-246
274-299
300-325
377-412
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1.9e-38 129-419
HMMPanther PTHR23125 F-BOX/LEUCINE 3.9e-62 125-427
HMMPanther PTHR23125:SF2 GB 3.9e-62 125-427
HMMPfam PF13516 LRR_6 0.45 194-216
superfamily SSF52047 RNI-like 1.8e-33 142-414
Wolf-PSORT
Lj1g3v3556950.1	nucl 5, cyto 5, cyto_nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3556950.1